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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6909277 chr6:26571537 A/T ZNF322B chr9:99957633-99961910:- 0.59 11.32 1.79E-26 Box Plot
THCA rs6910361 chr6:28651780 G/A BTN3A2 chr6:26365387-26378548:+ -0.45 -7.37 7.33E-13 Box Plot
THCA rs6910899 chr6:26524339 A/G ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs6910930 chr6:26524061 G/A ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs6911118 chr6:93556648 C/G NUP107 chr12:69080514-69139589:+ -0.24 -6.17 1.48E-9 Box Plot
THCA rs6911540 chr6:26603259 T/C ZNF322B chr9:99957633-99961910:- 0.74 15.45 5.62E-44 Box Plot
THCA rs6911936 chr6:151779157 A/C NEK5 chr13:52607747-52703214:- 0.58 6.91 1.59E-11 Box Plot
THCA rs6912292 chr6:26511805 C/A ZNF322B chr9:99957633-99961910:- 0.6 8.66 7.39E-17 Box Plot
THCA rs6912584 chr6:28309590 T/C ZFP57 chr6:29640169-29648887:- 0.38 6.17 1.46E-9 Box Plot
THCA rs6913398 chr6:26540593 T/G ZNF322B chr9:99957633-99961910:- 0.54 10.32 1.12E-22 Box Plot
THCA rs6913550 chr6:26540683 T/C ZNF322B chr9:99957633-99961910:- 0.57 7.86 2.51E-14 Box Plot
THCA rs6913652 chr6:170820428 G/A NCRNA00115 chr1:761587-762902:- 0.59 6.73 4.8E-11 Box Plot
THCA rs6915397 chr6:57264737 A/G GUSBL2 chr6:58246159-58287724:- -0.34 -6.7 5.82E-11 Box Plot
THCA rs6915555 chr6:26595267 G/T ZNF322B chr9:99957633-99961910:- 0.75 15.45 5.57E-44 Box Plot
THCA rs6915816 chr6:151778823 T/C NEK5 chr13:52607747-52703214:- 0.58 6.91 1.59E-11 Box Plot